Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876257.1_cds_XP_016436044.1_31946
CDS Infomation

[gene=LOC107762218] [db_xref=GeneID:107762218] [protein=probable galacturonosyltransferase 11] [protein_id=XP_016436044.1] [location=join(62298..62453,64863..66317)] [gbkey=CDS]
Sequence

ATGCGGCGGCGGGCGGCCGAATATCGGCGCCCGGTTCGAAGGAAGCTCTCTTGTTGGATC
TGTTCACTTCTTGGGATATTCTTAATTGCAGGTTTTGTATTGTTTGTAGTTCATCATCAC
CATGACCGCGAGGATCACGTAGAACAGCCTATTTTGGGAAGAGAGTCCAGGAATGAAGAG
GTTGTGCATGAGCATCTAAATCTTACACAAGAAATTTCAAGTGCTAATTCATATGCCAGA
CAGTTAGCAGAGCAGATGACATTAGCCAAAGCTTATATTGTTATTGCGAAAGAACACAAC
AATCTTCATCTTGCTTGGGAGCTAAGTTCAAAGATAAGAAGTTGTCAATTTTTACTCTCA
AAGGCTGCAATGAAGGAAGAGCCTATTTCTCTGGATGAAGCAGAACCAATAATAAAAAGT
CTATCTTCTCTTATCTTTAAGGCACAAGATGCGCATTATGATATTGCAACCACTATGATG
ACAATGAAATCTCACATTCAAGCTCTAGAGGAGCGTGCTAATGCTGCGTCTGTCCAAAGT
ATGATGTTTGGACAGTTAACAGCTGAATCCCTGCCCAAGAACCTACACTGCCTAGAAATC
AAACTCATGTCTGATTGGCTTACAAGAAAGTCGCTGCAGGATTTTGCTGATGAGAGAAGA
AACTCCCCTAGATTAGTGGACAATAATTTGTATCACTTCTGCATATTTTCAGATAATCTG
TTGGCAGTTTCAGCAGTTGTTAACTCAACGATGTCCAATGCTGATCACCCTAAGCAGCTT
GTGTTCCATATTGTAACAGATGTGATACACTATGGAATGATGCAGGCTTGGTTCTTAAAT
AATGACTTCAAAGGTTCTACAGTAGAAGTACAGAATATTGAAGACTTGACTTGGTTGAAT
TCATCTTATTCTCCAGCTTTAAAGCAGCTTAGAGAAGCAGACTCCAGGAAGTATTACTTT
GATGGGTCTGAGGATGCAAGTATCGAGCCAAAGTTCCGGAATCCAAAGTATATATCTTTG
TTGAATCACCTTCGGTTTTACATTCCTGAGATCTATCCCCAGTTAGAGAAGATAGTCTTC
CTTGACGATGATGTGGTAGTTCAGAAAGATCTGACACCTCTCTTTTCATTGGATTTGCAT
GGGAACGTGAACGGAGCAGTGGAAACTTGTCTTGAAGCTTTTCATCGTTATTACAAGTAT
CTCAATTTCTCGAATCCACTCATCAGCTCAAGGTTTGATCCCCAAGCCTGTGGGTGGGCA
TTTGGTATGAATGTTTTTGATCTGATGGCGTGGAGGAAAGCAAATGTTACTACACGATAT
CATTACTGGCTAGAACAAAATGCCGATAGAACGCTTTGGAAGTTGGGTACCCTTCCACCG
GGATTATTAGCTTTTTATGGATTGACAGAGCCGCTTGATAGGAGATGGCATGTCTTAGGA
TTAGGTTATGACCTTAACGTTGACAGTCGCCTGATAGAGAGTGCAGCAGTAGTTCATTTC
AATGGGAACATGAAGCCATGGCTCAAGTTGGGCATTAGCAAGTATAGACCTTTGTGGGAA
CGGTATGTAAATCATACACATCCATACCTTCGGGATTGCGCCACACATTGA

Peptide Sequence

PEP ID

XP_016436044.1
PEP Infomation

PREDICTED: probable galacturonosyltransferase 11 [Nicotiana tabacum]
Sequence

MRRRAAEYRRPVRRKLSCWICSLLGIFLIAGFVLFVVHHHHDREDHVEQPILGRESRNEE
VVHEHLNLTQEISSANSYARQLAEQMTLAKAYIVIAKEHNNLHLAWELSSKIRSCQFLLS
KAAMKEEPISLDEAEPIIKSLSSLIFKAQDAHYDIATTMMTMKSHIQALEERANAASVQS
MMFGQLTAESLPKNLHCLEIKLMSDWLTRKSLQDFADERRNSPRLVDNNLYHFCIFSDNL
LAVSAVVNSTMSNADHPKQLVFHIVTDVIHYGMMQAWFLNNDFKGSTVEVQNIEDLTWLN
SSYSPALKQLREADSRKYYFDGSEDASIEPKFRNPKYISLLNHLRFYIPEIYPQLEKIVF
LDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNPLISSRFDPQACGWA
FGMNVFDLMAWRKANVTTRYHYWLEQNADRTLWKLGTLPPGLLAFYGLTEPLDRRWHVLG
LGYDLNVDSRLIESAAVVHFNGNMKPWLKLGISKYRPLWERYVNHTHPYLRDCATH

Transcript Sequence

Gene sequence data has not been registered.